If you are creating a document with the new document creation feature, it creates automatically a folder in Google Drive of the organization within the general Pipedrive folder and saves the file in this folder.

If you upload a file it will be synced to the general Pipedrive folder without the creation of a organisation folder.

It would be great if the upload would trigger the creation of a organisation folder as well. If you don't know the name of the uploaded document it will be hard to find.